The detailed information of tRNA gene sequence


Sequence ID>WENV170671888
Genome IDLAHU01208157
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 569
End posion on genome 643
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattgtactt
tRNA gene sequence 
GGTAGGGTAGCTCAGTTGGTTAGAGCATAGGATTCATAAACCTAAGGTCGCGGGTTCGAT
CCCCGCCCCTACTACtt
Downstream region at tRNA end position 
ttacagatca
Secondary structure (Cloverleaf model)
>WENV170671888	Met	CAT
                   t      ACtt ttacagatca
                     G + T
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     G - C          C T
                    T     C G C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A   A
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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