The detailed information of tRNA gene sequence


Sequence ID>WENV170671891
Genome IDLAHU01209969
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 417
End posion on genome 494
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tggacttaat
tRNA gene sequence 
GGGGTCGTGGGGTAGCTTGGCCTATCCTTCGAGCTTTGGGAGCTTGGGACCTGAGTTCAA
ATCTCAGCGACCCCACCA
Downstream region at tRNA end position 
tttaattact
Secondary structure (Cloverleaf model)
>WENV170671891	Pro	TGG
                   t      ACCA tttaattact
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    T C G A        G      | | | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    C C T A        T     GGAC
                    C - G
                    G + T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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