The detailed information of tRNA gene sequence


Sequence ID>WENV170671910
Genome IDLAHU01216530
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 189
End posion on genome 113
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tttatgaaaT
tRNA gene sequence 
GGGCCCGTAGTTCAATTGGCTAGAACACCACATTCGCATTGTGGAGATTGGCGGTTCGAT
TCCGCCCGGGTCCATCt
Downstream region at tRNA end position 
tctattgctg
Secondary structure (Cloverleaf model)
>WENV170671910	Ala	CGC
                   T      ATCt tctattgctg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C C G C C     A
      T A A        A      | | | | |     G
    T       C T T G       G G C G G     C
    G       | | | |                 T T
    G       G A A C
      C T A        A     AGATT
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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