The detailed information of tRNA gene sequence


Sequence ID>WENV170671914
Genome IDLAHU01217752
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 598
End posion on genome 673
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gattctacag
tRNA gene sequence 
GGGCCTGTGGTCTAGTGGATATGGCGTCGGGCTTCGGACCCGAAGAACGTGGGTTCAAAT
CCCATCAGGCCCGCCT
Downstream region at tRNA end position 
tgttttatat
Secondary structure (Cloverleaf model)
>WENV170671914	Arg	TCG
                   g      GCCT tgttttatat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     A
    G       T C T G       G T G G G     C
    G         | + |                 T T
    A       T G G C
      T A          G     AGAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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