The detailed information of tRNA gene sequence


Sequence ID>WENV170671933
Genome IDLAHU01223482
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 488
End posion on genome 561
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttttgattaA
tRNA gene sequence 
GCCGGGGTTGTCGAGAGGCTCGGCCTCGGACTGCAGATCCGATTACGAGGGTTCAACTCC
CTCCCCCGGCTTCg
Downstream region at tRNA end position 
caaaggggac
Secondary structure (Cloverleaf model)
>WENV170671933	Cys	GCA
                   A      TTCg caaaggggac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    T     C T C C C     A
        G A        T      | | | | |     A
      A     G C T G       G A G G G     C
      G     | | + |                 T T
      G     C G G C
        C T        C     TTAC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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