The detailed information of tRNA gene sequence


Sequence ID>WENV170671959
Genome IDLAHU01242476
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 143
End posion on genome 71
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
atattttggg
tRNA gene sequence 
GGGCTGGTAGCTCAGATGGGAGAGCGTTGCCTTCGCAAGGCAGAGGCCGCGGGTTCAAAT
CCCGCCCAGTCCAttt
Downstream region at tRNA end position 
ctcactacct
Secondary structure (Cloverleaf model)
>WENV170671959	Ala	CGC
                   g      Attt ctcactacct
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    T + G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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