The detailed information of tRNA gene sequence


Sequence ID>WENV170671964
Genome IDLAHU01244791
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 455
End posion on genome 379
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tgtgtacact
tRNA gene sequence 
GCCGAAGTAGCTCAGTTGGTCAGAGCAACTGTTTTGTAAACAGTAGGTCGAGAGTTCGAA
TCTCTCCTTCGGCTCCA
Downstream region at tRNA end position 
gtgcagaggt
Secondary structure (Cloverleaf model)
>WENV170671964	Thr	TGT
                   t      TCCA gtgcagaggt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     G
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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