The detailed information of tRNA gene sequence


Sequence ID>WENV170671971
Genome IDLAHU01249511
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 106
End posion on genome 30
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaacaagtac
tRNA gene sequence 
TCCCCGGTAGCTCAATCGGCAGTAGCGGCTGGCTGTTAACCAGTAGGTTGCAAGTTCGAG
TCTTGCCCGGGGAGCCA
Downstream region at tRNA end position 
gatattccta
Secondary structure (Cloverleaf model)
>WENV170671971	Asn	GTT
                   c      GCCA gatattccta
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G T T C     A
      T A A        A      | | | | |     G
    C       C T C G       G C A A G     C
    G         | | |                 T T
    G       T A G C
      C A G        G     AGGTT
                    G + T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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