The detailed information of tRNA gene sequence


Sequence ID>WENV170672003
Genome IDLAHU01262895
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 583
End posion on genome 657
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cagcctcttg
tRNA gene sequence 
GTGCCTGTAGTTCAGGGGTAGAGCGCCAGATTGTGGATCTGGTTGTCGTGGGTTCGAAAC
CCACCAGGCACCCGA
Downstream region at tRNA end position 
caaagccgct
Secondary structure (Cloverleaf model)
>WENV170672003	His	GTG
                   g      CCGA caaagccgct
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          A A
                    T     C A C C C     A
        G A        A      | | | | |     G
      G     C T T G       G T G G G     C
      G     | | + |                 T T
      G     G A G C
        T A        G     TTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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