The detailed information of tRNA gene sequence


Sequence ID>WENV170672039
Genome IDLAHU01281285
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 126
End posion on genome 52
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttcctttgcg
tRNA gene sequence 
CGGGGAGTGGCGCAGCCTGGTTAGCGCGCTTGCCTTGGGAGCAAGAGGTCGACGGTTCGA
ATCCGTCCTCCCCGAttt
Downstream region at tRNA end position 
tttttcggaa
Secondary structure (Cloverleaf model)
>WENV170672039	Pro	TGG
                   g      Attt tttttcggaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T G C C     A
    C C G A        G      | | | | |     G
  T         C G C G       G A C G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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