The detailed information of tRNA gene sequence


Sequence ID>WENV170672048
Genome IDLAHU01284508
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 522
End posion on genome 446
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cccctataag
tRNA gene sequence 
GCCCAGGTAGCTCAGTCTGGGAGAGCGCTGCCCTGAAGAGGCAGTTGTCCCCGGTTCAAA
TCCGGGTCTGGGCACCA
Downstream region at tRNA end position 
aataatgcac
Secondary structure (Cloverleaf model)
>WENV170672048	Phe	GAA
                   g      ACCA aataatgcac
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G G G C C     A
      T G A        A      | | | | |     A
    C       C T C G       C C C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     TTGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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