The detailed information of tRNA gene sequence


Sequence ID>WENV170672049
Genome IDLAHU01284508
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 437
End posion on genome 366
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
caaataatgc
tRNA gene sequence 
ACATCAGTAGTGTAGCGGTTATCACCTGGCGTTGCCAACGCTAGAACCCGGGTTCGAATC
CCGGCTGATGTAttc
Downstream region at tRNA end position 
ttattttttt
Secondary structure (Cloverleaf model)
>WENV170672049	Gly	GCC
                   c      Attc ttattttttt
                     A - T
                     C - G
                     A - T
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | |                 T T
    T       T C A C
      T A          C     GAAC
                    T - A
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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