The detailed information of tRNA gene sequence


Sequence ID>WENV170672053
Genome IDLAHU01286755
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 94
End posion on genome 171
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccattcatgc
tRNA gene sequence 
GGGGTCGTAGTTAAGCCTGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGCGAGTTCGA
AGCCCGTCGACCCCGCCA
Downstream region at tRNA end position 
tttctttaaa
Secondary structure (Cloverleaf model)
>WENV170672053	Asp	GTC
                   c      GCCA tttctttaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          G A
                    T     T G C C C     A
    C C G A        A      + | |   |     G
  T         A T T G       G C G A G     C
  G         | | | |                 T T
  G         T A A C
    T T A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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