The detailed information of tRNA gene sequence


Sequence ID>WENV170672063
Genome IDLAHU01292466
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 425
End posion on genome 348
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aataaatcat
tRNA gene sequence 
GCCGTTGTAGCAAAGCTCGGCCATGCGCTAGACTCGTAATCTAGTTCGACGGGGGTTCAA
ATCCCCCCAACGGCTTCA
Downstream region at tRNA end position 
cattttaatt
Secondary structure (Cloverleaf model)
>WENV170672063	Thr	CGT
                   t      TTCA cattttaatt
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    T       A A C G       G G G G G     C
    C         | | |                 T T
    G       A T G C
      G C C        G     TTCGAC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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