The detailed information of tRNA gene sequence


Sequence ID>WENV170672065
Genome IDLAHU01293501
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 76
End posion on genome 152
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tggcctaatc
tRNA gene sequence 
GGGCTCGTAGCTCAGCTAGGTAGAGCAATCGGCTCTTAACCGATGGGCCGAGGGTTCGAA
TCCCTCCGAGCCCGCCA
Downstream region at tRNA end position 
tcattctatc
Secondary structure (Cloverleaf model)
>WENV170672065	Lys	CTT
                   c      GCCA tcattctatc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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