The detailed information of tRNA gene sequence


Sequence ID>WENV170672072
Genome IDLAHU01298277
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 812
End posion on genome 738
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
AGGCAAGTAGCTCAGGGGGAGAGCGCCATCCTGACGCGGTGGATGTCCAGGGTTCAAATC
CCTGCTTGCCTACCA
Downstream region at tRNA end position 
ttttaacttg
Secondary structure (Cloverleaf model)
>WENV170672072	Val	GAC
                   n      ACCA ttttaacttg
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C          T A
                    T     G T C C C     A
        G A        A      | | | | |     A
      G     C T C G       C A G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     ATGTC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  C       C
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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