The detailed information of tRNA gene sequence


Sequence ID>WENV170672092
Genome IDLAHU01305322
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 45
End posion on genome 122
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tagacctctc
tRNA gene sequence 
GTCCCCATCGTCTAGCCTGGTCTAGGACACGAGCTTTTCAAGCTTGCGACACCGGTTCGA
ATCCGGTTGGGGACGCTA
Downstream region at tRNA end position 
aaatctcaaa
Secondary structure (Cloverleaf model)
>WENV170672092	Glu	TTC
                   c      GCTA aaatctcaaa
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G G C C     A
    C C G A        C      | | | | |     G
  T         T C T G       A C C G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     CGAC
                    C - G
                    G + T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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