The detailed information of tRNA gene sequence


Sequence ID>WENV170672141
Genome IDLAZR01000006
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 204337
End posion on genome 204427
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccaggatcc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gatagcgaca
Secondary structure (Cloverleaf model)
>WENV170672141	Ser	GGA
                   c      GCCA gatagcgaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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