The detailed information of tRNA gene sequence


Sequence ID>WENV170672146
Genome IDLAZR01000006
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 305557
End posion on genome 305647
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcgcgttac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATATCTCAAAAGGGT
ATCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ctttgtggtt
Secondary structure (Cloverleaf model)
>WENV170672146	Ser	GCT
                   c      GCCA ctttgtggtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATATCTCAAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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