The detailed information of tRNA gene sequence


Sequence ID>WENV170672172
Genome IDLAZR01000017
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 298437
End posion on genome 298361
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattgtaacc
tRNA gene sequence 
GGTCCTATAGCTCAGCTGGTTAGAGCACCTGACTCATAATCAGGTGGTCCCTGGTTCGAG
TCCAGGTGGGACCACTA
Downstream region at tRNA end position 
gtaaaatcaa
Secondary structure (Cloverleaf model)
>WENV170672172	Met	CAT
                   c      ACTA gtaaaatcaa
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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