The detailed information of tRNA gene sequence


Sequence ID>WENV170672262
Genome IDLAZR01000041
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 466
End posion on genome 375
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagaattact
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGCCGAAAGGAACGGTTTGCTAAATCGTCGTAGGTGGAAACACT
TACCCAGGGTTCGAATCCCTGTCTCTCCGCAA
Downstream region at tRNA end position 
cgttatgttg
Secondary structure (Cloverleaf model)
>WENV170672262	Ser	GCT
                   t      GCAA cgttatgttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       C A G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTAGGTGGAAACACTTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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