The detailed information of tRNA gene sequence


Sequence ID>WENV170672348
Genome IDLAZR01000070
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 62563
End posion on genome 62653
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcgtgttac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATATCTCAAAAGGGT
ATCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ctttgtggct
Secondary structure (Cloverleaf model)
>WENV170672348	Ser	GCT
                   c      GCCA ctttgtggct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATATCTCAAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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