The detailed information of tRNA gene sequence


Sequence ID>WENV170672422
Genome IDLAZR01000141
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 90614
End posion on genome 90703
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgaatgcac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGGGAGACCGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttttcttc
Secondary structure (Cloverleaf model)
>WENV170672422	Ser	GGA
                   c      GCCA ttttttcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGAGACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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