The detailed information of tRNA gene sequence


Sequence ID>WENV170672774
Genome IDLAZR01001820
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 6201
End posion on genome 6276
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgcaaccga
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGCAGGCCGTGGGTTCGAGT
CCCTCTGCCCCTGCCA
Downstream region at tRNA end position 
ttcgccggaa
Secondary structure (Cloverleaf model)
>WENV170672774	Trp	CCA
                   a      GCCA ttcgccggaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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