The detailed information of tRNA gene sequence


Sequence ID>WENV170673101
Genome IDLAZR01006269
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 3671
End posion on genome 3761
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcaccctta
tRNA gene sequence 
GGAGAACTGGCCGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTATAGGTTAATAGCCT
ATCGAGGGTTCGAATCCCTCGTTCTCCGCCA
Downstream region at tRNA end position 
tttaatataa
Secondary structure (Cloverleaf model)
>WENV170673101	Ser	GGA
                   a      GCCA tttaatataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     C - G          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGTTAATAGCCTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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