The detailed information of tRNA gene sequence


Sequence ID>WENV170673301
Genome IDLAZR01010960
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 3343
End posion on genome 3267
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttattgga
tRNA gene sequence 
CGCGGGGTAGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGTCCCCGCTACCA
Downstream region at tRNA end position 
atactaaagg
Secondary structure (Cloverleaf model)
>WENV170673301	Met	CAT
                   a      ACCA atactaaagg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     A
    T       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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