The detailed information of tRNA gene sequence


Sequence ID>WENV170673379
Genome IDLAZR01012847
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 2305
End posion on genome 2216
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgcgtcggt
tRNA gene sequence 
GGAGATGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGCCCGGAAGGGTC
TCGTGGGTTCGAATCCCATCGTCTCCGCCA
Downstream region at tRNA end position 
cttgccccca
Secondary structure (Cloverleaf model)
>WENV170673379	Ser	GCT
                   t      GCCA cttgccccca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCCCGGAAGGGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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