The detailed information of tRNA gene sequence


Sequence ID>WENV170673924
Genome IDLAZR01034935
Search identical group
Phylum/Class[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
Species
Start position on genome 420
End posion on genome 509
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccccctaac
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAGACCGTC
TCCAGGGTTCGAATCCCTGTCTGTCCGCCA
Downstream region at tRNA end position 
caattctcag
Secondary structure (Cloverleaf model)
>WENV170673924	Ser	GGA
                   c      GCCA caattctcag
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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