The detailed information of tRNA gene sequence


Sequence ID>WENV170674521
Genome IDLBBO01000002
Search identical group
Phylum/Class[LBBO] hydrothermal vent metagenome; microbial mat from marine hydrothermal vent chimney in a deep-sea hydrothermal vent field
Species
Start position on genome 45220
End posion on genome 45145
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcttattctt
tRNA gene sequence 
AGGCCAATAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGCCGGGGGTTCGAGT
CCCTCTTGGCCTGCCA
Downstream region at tRNA end position 
caattaaaag
Secondary structure (Cloverleaf model)
>WENV170674521	Trp	CCA
                   t      GCCA caattaaaag
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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