The detailed information of tRNA gene sequence


Sequence ID>WENV170674665
Genome IDLCWY01000003
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 28333
End posion on genome 28415
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
aagctaaaac
tRNA gene sequence 
GCGGATGTGGCGTAATTGGTAGCCGCGCTAGACTTAGGATCTAGTGCCGAGAGGCGTGGG
GGTTCGAATCCCTCCATCCGCACtc
Downstream region at tRNA end position 
cggtaatact
Secondary structure (Cloverleaf model)
>WENV170674665	Leu	TAG
                   c      ACtc cggtaatact
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       T G C G       G G G G G     C
    G         | | |                 T T
    G       C C G C
      T A G        G     TGCCGAGAGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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