The detailed information of tRNA gene sequence


Sequence ID>WENV170674679
Genome IDLCWY01000056
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 16153
End posion on genome 16227
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgttttccct
tRNA gene sequence 
GCCGATGTAGCTCAGGGGTAGAGCGTTTCCTTGGTAAGGAAGAGGCCACGGGTTCAATTC
CCGTCATCGGCTCTA
Downstream region at tRNA end position 
ctgaaaaata
Secondary structure (Cloverleaf model)
>WENV170674679	Thr	GGT
                   t      TCTA ctgaaaaata
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T G C C C     A
        G A        A      | | | | |     A
      G     C T C G       A C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGCC
                    T + G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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