The detailed information of tRNA gene sequence


Sequence ID>WENV170674719
Genome IDLCWY01000953
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 2616
End posion on genome 2541
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aaataagtat
tRNA gene sequence 
GACCCATTAGCTCAGTTGGCAGAGCACCTGACTTTTAATCAGGGTGTCCCGCGTTCGAGT
CGCGGATGGGTCACCA
Downstream region at tRNA end position 
attgaggcgg
Secondary structure (Cloverleaf model)
>WENV170674719	Lys	TTT
                   t      ACCA attgaggcgg
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G G C G C     A
      T G A        A      | | | | |     G
    T       C T C G       C C G C G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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