The detailed information of tRNA gene sequence


Sequence ID>WENV170674740
Genome IDLCWY01001141
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 1876
End posion on genome 1949
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gaagacgaag
tRNA gene sequence 
GGGCTCGTGGTCTAGCCGGTTATGACGTCGCCTTGACATGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGAGCCCAtct
Downstream region at tRNA end position 
ttttgatgga
Secondary structure (Cloverleaf model)
>WENV170674740	Val	GAC
                   g      Atct ttttgatgga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    C       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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