The detailed information of tRNA gene sequence


Sequence ID>WENV170674741
Genome IDLCWY01001401
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 696
End posion on genome 770
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actactccga
tRNA gene sequence 
AGCGAGGTGGGGTAGTCAGGAGATCCCGACGGGCTCATAACCCGTAGATCGATGGTTCAA
ATCCATCCCTCGCTAtcc
Downstream region at tRNA end position 
tttttttatc
Secondary structure (Cloverleaf model)
>WENV170674741	Met	CAT
                   a      Atcc tttttttatc
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A G A          G     AGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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