The detailed information of tRNA gene sequence


Sequence ID>WENV170674743
Genome IDLCWY01001468
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 28
End posion on genome 103
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aggccgtcat
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGAAT
CCGCTTACCTCCACCA
Downstream region at tRNA end position 
tttcactaac
Secondary structure (Cloverleaf model)
>WENV170674743	Ala	TGC
                   t      ACCA tttcactaac
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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