The detailed information of tRNA gene sequence


Sequence ID>WENV170674766
Genome IDLCWY01003139
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 1380
End posion on genome 1305
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnatttttt
tRNA gene sequence 
CGGGGTGTAGCGTAGCCCGGTTAGCGCGCCTGCTTTGGGAGCAGGAGGTCGCAAGTTCGA
ATCTTGCCACCCCGACtt
Downstream region at tRNA end position 
gaaaatcaaa
Secondary structure (Cloverleaf model)
>WENV170674766	Pro	TGG
                   t      ACtt gaaaatcaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T T C     A
    C C G A        A      | | | | |     G
  C         T G C G       G C A A G     C
  G         + | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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