The detailed information of tRNA gene sequence


Sequence ID>WENV170674790
Genome IDLCWY01003819
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 252
End posion on genome 169
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccaacatag
tRNA gene sequence 
GCCGAGGTAGTCTAGTCCGGGAAGGCGGTGGCCTCGAAAGCCACTGGTGTTTGCACCTCG
GGAGTTCAAATCTCCCCCTCGGCGttc
Downstream region at tRNA end position 
tggcctgctt
Secondary structure (Cloverleaf model)
>WENV170674790	Ser	CGA
                   g      Gttc tggcctgctt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGTTTGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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