The detailed information of tRNA gene sequence


Sequence ID>WENV170674813
Genome IDLCWY01006895
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 390
End posion on genome 463
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
gtgaggaagc
tRNA gene sequence 
GCGATAATAGTCTAGTGGTAGGACAGGGGCTTCCCAAGCCTCTAGCCCGGGTTCGAATCC
CGGTTATCGCATCA
Downstream region at tRNA end position 
caatgcactc
Secondary structure (Cloverleaf model)
>WENV170674813	Gly	CCC
                   c      ATCA caatgcactc
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T
                     A - T          T A
                    T     G G C C C     A
        G A        A      | | | | |     G
      T     T C T G       C C G G G     C
      G     + | | |                 T T
      G     G G A C
        T A        A     TAGC
                    G - C
                    G + T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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