The detailed information of tRNA gene sequence


Sequence ID>WENV170674842
Genome IDLCWY01009032
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 114
End posion on genome 187
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cataattttc
tRNA gene sequence 
GCTGATATAGTGTAGTCGGCCAATCATGTAGGACTCTCACTCCTACGACTGGGGTTCAAA
TCCCCATATCAGCAtct
Downstream region at tRNA end position 
gggtctacct
Secondary structure (Cloverleaf model)
>WENV170674842	Glu	CTC
                   c      Atct gggtctacct
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     A C C C C     A
    C T G A        A      | | | | |     A
  G         T G T G       T G G G G     C
  G           | | +                 T T
  C         T C A T
    C A A          G     CGAC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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