The detailed information of tRNA gene sequence


Sequence ID>WENV170674845
Genome IDLCWY01009847
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 628
End posion on genome 554
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnnntagtgt
tRNA gene sequence 
TCCAGAGTAGCTCAATGGTAGAGCATCCGGCTGTTAACCGGCAGGTTGGAGGTTCGAGTC
CTCTCTCTGGAGCCA
Downstream region at tRNA end position 
cgcatgccga
Secondary structure (Cloverleaf model)
>WENV170674845	Asn	GTT
                   t      GCCA cgcatgccga
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     T C T C C     A
        A A        A      + | | | |     G
      T     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTT
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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