The detailed information of tRNA gene sequence


Sequence ID>WENV170674846
Genome IDLCWY01009847
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 548
End posion on genome 460
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
agccacgcat
tRNA gene sequence 
GCCGAAGTGGCGGAACTGGCAGACGCACAGGACTTAAAATCCTGCGATCCTATAAGATCG
TACCGGTTCGATTCCGGTCTTCGGCACCA
Downstream region at tRNA end position 
ggattttctt
Secondary structure (Cloverleaf model)
>WENV170674846	Leu	TAA
                   t      ACCA ggattttctt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     T G G C C     A
      C A A        G      | | | | |     G
    T       G G C G       A C C G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGATCCTATAAGATCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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