The detailed information of tRNA gene sequence


Sequence ID>WENV170674850
Genome IDLCWY01009847
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 165
End posion on genome 90
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
agccatactt
tRNA gene sequence 
GACCCATTAGCTCAGTTGGCAGAGCACCTGACTTTTAATCAGGGTGTCCCGCGTTCGAGT
CGCGGATGGGTCACCA
Downstream region at tRNA end position 
ggagaggtgt
Secondary structure (Cloverleaf model)
>WENV170674850	Lys	TTT
                   t      ACCA ggagaggtgt
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G G C G C     A
      T G A        A      | | | | |     G
    T       C T C G       C C G C G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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