The detailed information of tRNA gene sequence


Sequence ID>WENV170674877
Genome IDLCWY01015072
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 283
End posion on genome 207
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attcttatga
tRNA gene sequence 
GGGCCTTTAGCTCAGATGGTTAGAGCATCCGGCTCATAACCGGCAGGTGCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
cattttcctt
Secondary structure (Cloverleaf model)
>WENV170674877	Met	CAT
                   a      ACCA cattttcctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      A G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTG
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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