The detailed information of tRNA gene sequence


Sequence ID>WENV170674898
Genome IDLCWY01019170
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 220
End posion on genome 146
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caaaacgatt
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGACTGCAAATCCTTTATTCCCCAGTTCGAATC
TGGGTGCCGCCTCCA
Downstream region at tRNA end position 
ctaaaatacg
Secondary structure (Cloverleaf model)
>WENV170674898	Cys	GCA
                   t      TCCA ctaaaatacg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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