The detailed information of tRNA gene sequence


Sequence ID>WENV170674905
Genome IDLCWY01019878
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 16
End posion on genome 92
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttagttttgt
tRNA gene sequence 
CCGGGTGTAGCGCAGTTTGGTAGCGCACATGGTTTGGGACCATGGGGCCGGGAGTTCGAA
TCTCTCCACCCGGACCA
Downstream region at tRNA end position 
ctatttgccc
Secondary structure (Cloverleaf model)
>WENV170674905	Pro	TGG
                   t      ACCA ctatttgccc
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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