The detailed information of tRNA gene sequence


Sequence ID>WENV170674912
Genome IDLCWY01022200
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 272
End posion on genome 188
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cttctaatat
tRNA gene sequence 
GGAGGGGTGCCCGAGTGGTTAAAGGGAGCAGACTGTAAATCTGCCGGCGATGCCTACAAA
GGTTCAAATCCTTTCCCCTCCACCA
Downstream region at tRNA end position 
taatttgcgg
Secondary structure (Cloverleaf model)
>WENV170674912	Tyr	GTA
                   t      ACCA taatttgcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T T C C     A
      T G A        G      | | | | |     A
    G       G C C C       A A A G G     C
    G         | | |                 T T
    T       A G G G
      T A A        A     CGGCGATGCCTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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