The detailed information of tRNA gene sequence


Sequence ID>WENV170674919
Genome IDLCWY01023824
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 298
End posion on genome 213
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
atcaaatttt
tRNA gene sequence 
GGAGGGGTGCCCGAGTGGTTAAAGGGAGCAGACTGTAAATCTGCCGGCGACGCCTTCGAA
GGTTCAAATCCTTCTCCCCTCCACC
Downstream region at tRNA end position 
Attatgcggg
Secondary structure (Cloverleaf model)
>WENV170674919	Tyr	GTA
                   t      CACC Attatgcggg
                     G - C
                     G + T
                     A   C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    G       G C C C       G A A G G     C
    G         | | |                 T T
    T       A G G G
      T A A        A     CGGCGACGCCTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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