The detailed information of tRNA gene sequence


Sequence ID>WENV170674933
Genome IDLCWY01026288
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 98
End posion on genome 173
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ggcccaccat
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGCCAGCGGTTCGAAT
CCGCTTACCTCCACCA
Downstream region at tRNA end position 
ttatatttat
Secondary structure (Cloverleaf model)
>WENV170674933	Ala	TGC
                   t      ACCA ttatatttat
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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