The detailed information of tRNA gene sequence


Sequence ID>WENV170674939
Genome IDLCWY01027080
Search identical group
Phylum/Class[LCWY] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 22
End posion on genome 98
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
taaatcgtgt
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGGGTTCAAA
TCCCTCCGCCCCGACCA
Downstream region at tRNA end position 
gtacaatgcc
Secondary structure (Cloverleaf model)
>WENV170674939	Pro	TGG
                   t      ACCA gtacaatgcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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