The detailed information of tRNA gene sequence


Sequence ID>WENV170674966
Genome IDLCWZ01000085
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 9548
End posion on genome 9466
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
aagctaaaac
tRNA gene sequence 
GCGGATGTGGCGTAATTGGTAGCCGCGCTAGACTTAGGATCTAGTGCCGAGAGGCGTGGG
GGTTCGAATCCCTCCATCCGCACtc
Downstream region at tRNA end position 
cggtaatact
Secondary structure (Cloverleaf model)
>WENV170674966	Leu	TAG
                   c      ACtc cggtaatact
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       T G C G       G G G G G     C
    G         | | |                 T T
    G       C C G C
      T A G        G     TGCCGAGAGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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